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» A Rationale-based Analysis Tool
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BIBE
2010
IEEE
143views Bioinformatics» more  BIBE 2010»
15 years 8 months ago
The Effect of Sequence Error and Partial Training Data on BLAST Accuracy
- Metagenomics is the study of environmental samples. Because few tools exist for metagenomic analysis, a natural step has been to utilize the popular homology tool, BLAST, to sear...
Steven D. Essinger, Gail L. Rosen
AMAI
2007
Springer
15 years 7 months ago
Relational concept discovery in structured datasets
Relational datasets, i.e., datasets in which individuals are described both by their own features and by their relations to other individuals, arise from various sources such as d...
Marianne Huchard, Mohamed Rouane Hacene, Cyril Rou...
BMCBI
2010
137views more  BMCBI 2010»
15 years 6 months ago
Biana: a software framework for compiling biological interactions and analyzing networks
Background: The analysis and usage of biological data is hindered by the spread of information across multiple repositories and the difficulties posed by different nomenclature sy...
Javier Garcia-Garcia, Emre Guney, Ramon Aragues, J...
BMCBI
2008
117views more  BMCBI 2008»
15 years 6 months ago
New resampling method for evaluating stability of clusters
Background: Hierarchical clustering is a widely applied tool in the analysis of microarray gene expression data. The assessment of cluster stability is a major challenge in cluste...
Irina Gana Dresen, Tanja Boes, Johannes Hüsin...
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BMCBI
2008
123views more  BMCBI 2008»
15 years 6 months ago
PocketMatch: A new algorithm to compare binding sites in protein structures
Background: Recognizing similarities and deriving relationships among protein molecules is a fundamental requirement in present-day biology. Similarities can be present at various...
Kalidas Yeturu, Nagasuma Chandra