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WSC
2004
15 years 8 months ago
Data Farming Coevolutionary Dynamics in RePast
This paper describes the application of data farming techniques (Brandstein and Horne 1998) to explore various aspects of coevolutionary dynamics (McKelvey 2002) in organization s...
Brian F. Tivnan
BMCBI
2010
86views more  BMCBI 2010»
15 years 7 months ago
Mining protein loops using a structural alphabet and statistical exceptionality
Background: Protein loops encompass 50% of protein residues in available three-dimensional structures. These regions are often involved in protein functions, e.g. binding site, ca...
Leslie Regad, Juliette Martin, Grégory Nuel...
BMCBI
2010
120views more  BMCBI 2010»
15 years 7 months ago
Short clones or long clones? A simulation study on the use of paired reads in metagenomics
Background: Metagenomics is the study of environmental samples using sequencing. Rapid advances in sequencing technology are fueling a vast increase in the number and scope of met...
Suparna Mitra, Max Schubach, Daniel H. Huson
BMCBI
2008
142views more  BMCBI 2008»
15 years 7 months ago
Identification of biomarkers for genotyping Aspergilli using non-linear methods for clustering and classification
Background: In the present investigation, we have used an exhaustive metabolite profiling approach to search for biomarkers in recombinant Aspergillus nidulans (mutants that produ...
Irene Kouskoumvekaki, Zhiyong Yang, Svava Ó...
BMCBI
2006
126views more  BMCBI 2006»
15 years 6 months ago
Effect of data normalization on fuzzy clustering of DNA microarray data
Background: Microarray technology has made it possible to simultaneously measure the expression levels of large numbers of genes in a short time. Gene expression data is informati...
Seo Young Kim, Jae Won Lee, Jong Sung Bae