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BMCBI
2005
94views more  BMCBI 2005»
15 years 6 months ago
YANA - a software tool for analyzing flux modes, gene-expression and enzyme activities
Background: A number of algorithms for steady state analysis of metabolic networks have been developed over the years. Of these, Elementary Mode Analysis (EMA) has proven especial...
Roland Schwarz, Patrick Musch, Axel von Kamp, Bern...
WCET
2010
15 years 4 months ago
Hybrid measurement-based WCET analysis at the source level using object-level traces
Hybrid measurement-based approaches to worst-case execution time (WCET) analysis combine measured execution times of small program segments using static analysis of the larger sof...
Adam Betts, Nicholas Merriam, Guillem Bernat
BMCBI
2011
14 years 10 months ago
FFCA: a feasibility-based method for flux coupling analysis of metabolic networks
Background: Flux coupling analysis (FCA) is a useful method for finding dependencies between fluxes of a metabolic network at steady-state. FCA classifies reactions into subsets (...
László Dávid, Sayed-Amir Mara...
NAR
2011
211views Computer Vision» more  NAR 2011»
14 years 9 months ago
mESAdb: microRNA Expression and Sequence Analysis Database
MicroRNA expression and sequence analysis database (http://konulab.fen.bilkent.edu.tr/mirna/) (mESAdb) is a regularly updated database for the multivariate analysis of sequences a...
Koray D. Kaya, Gökhan Karakülah, Cengiz ...
BMCBI
2010
133views more  BMCBI 2010»
15 years 3 months ago
Initial steps towards a production platform for DNA sequence analysis on the grid
Background: Bioinformatics is confronted with a new data explosion due to the availability of high throughput DNA sequencers. Data storage and analysis becomes a problem on local ...
Angela C. M. Luyf, Barbera D. C. van Schaik, Miche...