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ICPPW
2009
IEEE
15 years 5 months ago
A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data
Identifying peptides, which are short polymeric chains of amino acid residues in a protein sequence, is of fundamental importance in systems biology research. The most popular appr...
Gaurav Ramesh Kulkarni, Ananth Kalyanaraman, Willi...
PLDI
2012
ACM
13 years 10 months ago
Scalable and precise dynamic datarace detection for structured parallelism
Existing dynamic race detectors suffer from at least one of the following three limitations: (i) space overhead per memory location grows linearly with the number of parallel thre...
Raghavan Raman, Jisheng Zhao, Vivek Sarkar, Martin...
TKDE
2002
148views more  TKDE 2002»
15 years 7 months ago
Parallel Star Join + DataIndexes: Efficient Query Processing in Data Warehouses and OLAP
On-Line Analytical Processing (OLAP) refers to the technologies that allow users to efficiently retrieve data from the data warehouse for decision-support purposes. Data warehouses...
Anindya Datta, Debra E. VanderMeer, Krithi Ramamri...
DAGSTUHL
2007
15 years 9 months ago
Parallelism through Digital Circuit Design
Abstract. Two ways to exploit chips with a very large number of transistors are multicore processors and programmable logic chips. Some data parallel algorithms can be executed eï¬...
John O'Donnell
PLDI
1993
ACM
15 years 11 months ago
Global Optimizations for Parallelism and Locality on Scalable Parallel Machines
Data locality is critical to achievinghigh performance on large-scale parallel machines. Non-local data accesses result in communication that can greatly impact performance. Thus ...
Jennifer-Ann M. Anderson, Monica S. Lam