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BMCBI
2011
15 years 1 months ago
Motif-guided sparse decomposition of gene expression data for regulatory module identification
Background: Genes work coordinately as gene modules or gene networks. Various computational approaches have been proposed to find gene modules based on gene expression data; for e...
Ting Gong, Jianhua Xuan, Li Chen, Rebecca B. Riggi...
VIS
2004
IEEE
204views Visualization» more  VIS 2004»
16 years 7 months ago
Exploration of the Brain's White Matter Pathways with Dynamic Queries
Diffusion Tensor Imaging (DTI) is a magnetic resonance imaging method that can be used to measure local information about the structure of white matter within the human brain. Com...
David Akers, Anthony Sherbondy, Rachel Mackenzie, ...
CF
2007
ACM
15 years 10 months ago
Parallel genomic sequence-search on a massively parallel system
In the life sciences, genomic databases for sequence search have been growing exponentially in size. As a result, faster sequencesearch algorithms to search these databases contin...
Oystein Thorsen, Brian E. Smith, Carlos P. Sosa, K...
BMCBI
2008
172views more  BMCBI 2008»
15 years 6 months ago
Compo: composite motif discovery using discrete models
Background: Computational discovery of motifs in biomolecular sequences is an established field, with applications both in the discovery of functional sites in proteins and regula...
Geir Kjetil Sandve, Osman Abul, Finn Drablø...
CF
2010
ACM
15 years 11 months ago
Load balancing using dynamic cache allocation
Supercomputers need a huge budget to be built and maintained. To maximize the usage of their resources, application developers spend time to optimize the code of the parallel appl...
Miquel Moretó, Francisco J. Cazorla, Rizos ...