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ALMOB
2006
138views more  ALMOB 2006»
15 years 6 months ago
A combinatorial optimization approach for diverse motif finding applications
Background: Discovering approximately repeated patterns, or motifs, in biological sequences is an important and widely-studied problem in computational molecular biology. Most fre...
Elena Zaslavsky, Mona Singh
FPGA
2000
ACM
168views FPGA» more  FPGA 2000»
15 years 10 months ago
A benchmark suite for evaluating configurable computing systems--status, reflections, and future directions
This paper presents a benchmark suite for evaluating a configurable computing system's infrastructure, both tools and architecture. A novel aspect of this work is the use of ...
S. Kumar, Luiz Pires, Subburajan Ponnuswamy, C. Na...
BMCBI
2007
133views more  BMCBI 2007»
15 years 6 months ago
Semantic integration to identify overlapping functional modules in protein interaction networks
Background: The systematic analysis of protein-protein interactions can enable a better understanding of cellular organization, processes and functions. Functional modules can be ...
Young-Rae Cho, Woochang Hwang, Murali Ramanathan, ...
GECCO
2010
Springer
189views Optimization» more  GECCO 2010»
15 years 11 months ago
Knowledge mining with genetic programming methods for variable selection in flavor design
This paper presents a novel approach for knowledge mining from a sparse and repeated measures dataset. Genetic programming based symbolic regression is employed to generate multip...
Katya Vladislavleva, Kalyan Veeramachaneni, Matt B...
CEC
2010
IEEE
15 years 4 months ago
Active Learning Genetic programming for record deduplication
The great majority of genetic programming (GP) algorithms that deal with the classification problem follow a supervised approach, i.e., they consider that all fitness cases availab...
Junio de Freitas, Gisele L. Pappa, Altigran Soares...