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ISBRA
2010
Springer
16 years 1 months ago
Modeling without Borders: Creating and Annotating VCell Models Using the Web
Biological research is becoming increasingly complex and data-rich, with multiple public databases providing a variety of resources: hundreds of thousands of substances and interac...
Michael L. Blinov, Oliver Ruebenacker, James C. Sc...
KDD
2009
ACM
230views Data Mining» more  KDD 2009»
15 years 11 months ago
Grouped graphical Granger modeling methods for temporal causal modeling
We develop and evaluate an approach to causal modeling based on time series data, collectively referred to as“grouped graphical Granger modeling methods.” Graphical Granger mo...
Aurelie C. Lozano, Naoki Abe, Yan Liu, Saharon Ros...
TACAS
2007
Springer
99views Algorithms» more  TACAS 2007»
16 years 26 days ago
"Don't Care" Modeling: A Logical Framework for Developing Predictive System Models
Analysis of biological data often requires an understanding of components of pathways and/or networks and their mutual dependency relationships. Such systems are often analyzed and...
Hillel Kugler, Amir Pnueli, Michael J. Stern, E. J...
CVPR
2010
IEEE
15 years 10 months ago
Ray Markov Random Fields for Image-Based 3D Modeling: Model and Efficient Inference
In this paper, we present an approach to multi-view image-based 3D reconstruction by statistically inversing the ray-tracing based image generation process. The proposed algorithm...
Shubao Liu, David Cooper
215
Voted
LICS
2010
IEEE
15 years 5 months ago
Abstracting the Differential Semantics of Rule-Based Models: Exact and Automated Model Reduction
ing the differential semantics of rule-based models: exact and automated model reduction (Invited Lecture) Vincent Danos∗§, J´erˆome Feret†, Walter Fontana‡, Russell Harme...
Vincent Danos, Jérôme Feret, Walter F...