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BMCBI
2005
93views more  BMCBI 2005»
15 years 6 months ago
Multiple sequence alignment accuracy and evolutionary distance estimation
Background: Sequence alignment is a common tool in bioinformatics and comparative genomics. It is generally assumed that multiple sequence alignment yields better results than pai...
Michael S. Rosenberg
BMCBI
2005
97views more  BMCBI 2005»
15 years 6 months ago
Phylogenetic reconstruction of ancestral character states for gene expression and mRNA splicing data
Background: As genomes evolve after speciation, gene content, coding sequence, gene expression, and splicing all diverge with time from ancestors with close relatives. A minimum e...
Roald Rossnes, Ingvar Eidhammer, David A. Liberles
TVCG
2008
118views more  TVCG 2008»
15 years 6 months ago
Visual Perception and Mixed-Initiative Interaction for Assisted Visualization Design
This paper describes the integration of perceptual guidelines from human vision with an AI-based mixed-initiative search strategy. The result is a visualization assistant called Vi...
Christopher G. Healey, Sarat Kocherlakota, Vivek R...
TVLSI
2008
139views more  TVLSI 2008»
15 years 6 months ago
Ternary CAM Power and Delay Model: Extensions and Uses
Applications in computer networks often require high throughput access to large data structures for lookup and classification. While advanced algorithms exist to speed these search...
Banit Agrawal, Timothy Sherwood
BMCBI
2004
143views more  BMCBI 2004»
15 years 6 months ago
Comparing functional annotation analyses with Catmap
Background: Ranked gene lists from microarray experiments are usually analysed by assigning significance to predefined gene categories, e.g., based on functional annotations. Tool...
Thomas Breslin, Patrik Edén, Morten Krogh
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