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SPAA
1997
ACM
15 years 10 months ago
Efficient Detection of Determinacy Races in Cilk Programs
A parallel multithreaded program that is ostensibly deterministic may nevertheless behave nondeterministically due to bugs in the code. These bugs are called determinacy races, an...
Mingdong Feng, Charles E. Leiserson
BMCBI
2010
124views more  BMCBI 2010»
15 years 6 months ago
Estimation and efficient computation of the true probability of recurrence of short linear protein sequence motifs in unrelated
Background: Large datasets of protein interactions provide a rich resource for the discovery of Short Linear Motifs (SLiMs) that recur in unrelated proteins. However, existing met...
Norman E. Davey, Richard J. Edwards, Denis C. Shie...
BMCBI
2008
89views more  BMCBI 2008»
15 years 6 months ago
Increasing the efficiency of bacterial transcription simulations: When to exclude the genome without loss of accuracy
Background: Simulating the major molecular events inside an Escherichia coli cell can lead to a very large number of reactions that compose its overall behaviour. Not only should ...
Marco A. J. Iafolla, Guang Qiang Dong, David R. Mc...
BMCBI
2008
131views more  BMCBI 2008»
15 years 6 months ago
CoCoNUT: an efficient system for the comparison and analysis of genomes
Background: Comparative genomics is the analysis and comparison of genomes from different species. This area of research is driven by the large number of sequenced genomes and hea...
Mohamed Ibrahim Abouelhoda, Stefan Kurtz, Enno Ohl...
CAL
2008
15 years 6 months ago
BENoC: A Bus-Enhanced Network on-Chip for a Power Efficient CMP
Network-on-Chips (NoCs) outperform buses in terms of scalability, parallelism and system modularity and therefore are considered as the main interconnect infrastructure in future c...
I. Walter, Israel Cidon, Avinoam Kolodny