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BMCBI
2010
113views more  BMCBI 2010»
15 years 6 months ago
Efficient protein alignment algorithm for protein search
Background: Proteins show a great variety of 3D conformations, which can be used to infer their evolutionary relationship and to classify them into more general groups; therefore ...
Zaixin Lu, Zhiyu Zhao, Bin Fu
EDBT
2009
ACM
156views Database» more  EDBT 2009»
15 years 10 months ago
Efficient skyline retrieval with arbitrary similarity measures
A skyline query returns a set of objects that are not dominated by other objects. An object is said to dominate another if it is closer to the query than the latter on all factors...
Deepak P, Prasad M. Deshpande, Debapriyo Majumdar,...
BMCBI
2008
211views more  BMCBI 2008»
15 years 6 months ago
CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
Svetlin Manavski, Giorgio Valle
DATE
2003
IEEE
87views Hardware» more  DATE 2003»
15 years 11 months ago
A Novel, Low-Cost Algorithm for Sequentially Untestable Fault Identification
This paper presents a new and low-cost approach for identifying sequentially untestable faults. Unlike the single fault theorem, where the stuck-at fault is injected only in the r...
Manan Syal, Michael S. Hsiao
VTS
2003
IEEE
122views Hardware» more  VTS 2003»
15 years 11 months ago
A Reconfigurable Shared Scan-in Architecture
In this paper, an efficient technique for test data volume reduction based on the shared scan-in (Illinois Scan) architecture and the scan chain reconfiguration (Dynamic Scan) arc...
Samitha Samaranayake, Emil Gizdarski, Nodari Sitch...