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BMCBI
2011
15 years 1 months ago
A discriminative method for family-based protein remote homology detection that combines inductive logic programming and proposi
Background: Remote homology detection is a hard computational problem. Most approaches have trained computational models by using either full protein sequences or multiple sequenc...
Juliana S. Bernardes, Alessandra Carbone, Gerson Z...
RECOMB
2005
Springer
16 years 7 months ago
An Interaction-Dependent Model for Transcription Factor Binding
Transcriptional regulation is accomplished by several transcription factor proteins that bind to specific DNA elements in the relative vicinity of the gene, and interact with each ...
Li-San Wang, Shane T. Jensen, Sridhar Hannenhalli
AINA
2008
IEEE
16 years 1 months ago
Missing Value Estimation for Time Series Microarray Data Using Linear Dynamical Systems Modeling
The analysis of gene expression time series obtained from microarray experiments can be effectively exploited to understand a wide range of biological phenomena from the homeostat...
Connie Phong, Raul Singh
SEMWEB
2005
Springer
16 years 11 days ago
Modeling Degrees of Conceptual Overlap in Semantic Web Ontologies
Information retrieval systems have to deal with uncertain knowledge and query results should reflect this uncertainty in some manner. However, Semantic Web ontologies are based on...
Markus Holi, Eero Hyvönen
SIGUCCS
2003
ACM
16 years 4 days ago
Computing labs and technology classroom (CLTC) initiative: a model for distributed support
DePauw University is a small, liberal arts institution with 2200 undergraduate residential students and 222 faculty members, located in Greencastle, Indiana. The challenges of sup...
Lynda S. LaRoche, Julianne M. Miranda, Angela P. S...