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BMCBI
2004
133views more  BMCBI 2004»
15 years 6 months ago
Evaluation of several lightweight stochastic context-free grammars for RNA secondary structure prediction
Background: RNA secondary structure prediction methods based on probabilistic modeling can be developed using stochastic context-free grammars (SCFGs). Such methods can readily co...
Robin D. Dowell, Sean R. Eddy
TC
2010
15 years 1 months ago
Model-Driven System Capacity Planning under Workload Burstiness
In this paper, we define and study a new class of capacity planning models called MAP queueing networks. MAP queueing networks provide the first analytical methodology to describe ...
Giuliano Casale, Ningfang Mi, Evgenia Smirni
MICRO
2010
IEEE
173views Hardware» more  MICRO 2010»
15 years 4 months ago
Single-Chip Heterogeneous Computing: Does the Future Include Custom Logic, FPGAs, and GPGPUs?
To extend the exponential performance scaling of future chip multiprocessors, improving energy efficiency has become a first-class priority. Single-chip heterogeneous computing ha...
Eric S. Chung, Peter A. Milder, James C. Hoe, Ken ...
DAC
2008
ACM
16 years 7 months ago
Predictive design space exploration using genetically programmed response surfaces
Exponential increases in architectural design complexity threaten to make traditional processor design optimization techniques intractable. Genetically programmed response surface...
Henry Cook, Kevin Skadron
BMCBI
2011
15 years 1 months ago
ASPDock: protein-protein docking algorithm using atomic solvation parameters model
Background: Atomic Solvation Parameters (ASP) model has been proven to be a very successful method of calculating the binding free energy of protein complexes. This suggests that ...
Lin Li, Dachuan Guo, Yangyu Huang, Shiyong Liu, Yi...