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» A Method for Dynamic Clustering of Data
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BMCBI
2010
105views more  BMCBI 2010»
15 years 6 months ago
Effects of scanning sensitivity and multiple scan algorithms on microarray data quality
Background: Maximizing the utility of DNA microarray data requires optimization of data acquisition through selection of an appropriate scanner setting. To increase the amount of ...
Andrew Williams, Errol M. Thomson
BMCBI
2007
169views more  BMCBI 2007»
15 years 6 months ago
Transcriptional regulatory network refinement and quantification through kinetic modeling, gene expression microarray data and i
Background: Gene expression microarray and other multiplex data hold promise for addressing the challenges of cellular complexity, refined diagnoses and the discovery of well-targ...
Abdallah Sayyed-Ahmad, Kagan Tuncay, Peter J. Orto...
KBSE
2002
IEEE
15 years 11 months ago
Generating Test Data for Functions with Pointer Inputs
Generating test inputs for a path in a function with integer and real parameters is an important but difficult problem. The problem becomes more difficult when pointers are pass...
Srinivas Visvanathan, Neelam Gupta
BMCBI
2011
14 years 10 months ago
Gene set analysis for longitudinal gene expression data
Background: Gene set analysis (GSA) has become a successful tool to interpret gene expression profiles in terms of biological functions, molecular pathways, or genomic locations. ...
Ke Zhang, Haiyan Wang, Arne C. Bathke, Solomon W. ...
PVLDB
2010
195views more  PVLDB 2010»
15 years 1 months ago
Trie-Join: Efficient Trie-based String Similarity Joins with Edit-Distance Constraints
A string similarity join finds similar pairs between two collections of strings. It is an essential operation in many applications, such as data integration and cleaning, and has ...
Jiannan Wang, Guoliang Li, Jianhua Feng