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BMCBI
2010
183views more  BMCBI 2010»
15 years 6 months ago
SOPRA: Scaffolding algorithm for paired reads via statistical optimization
Background: High throughput sequencing (HTS) platforms produce gigabases of short read (<100 bp) data per run. While these short reads are adequate for resequencing application...
Adel Dayarian, Todd P. Michael, Anirvan M. Sengupt...
FSTTCS
2009
Springer
15 years 11 months ago
Bounded Size Graph Clustering with Applications to Stream Processing
We introduce a graph clustering problem motivated by a stream processing application. Input to our problem is an undirected graph with vertex and edge weights. A cluster is a subse...
Rohit Khandekar, Kirsten Hildrum, Sujay Parekh, De...
ICSE
2001
IEEE-ACM
15 years 11 months ago
JMOCHA: A Model Checking Tool that Exploits Design Structure
Mocha is a model checker based on the theme of exploiting design modularity: instead of manipulating unstructured state-transition graphs, it supports the hierarchical modeling fra...
Rajeev Alur, Luca de Alfaro, Radu Grosu, Thomas A....
PPDP
1999
Springer
15 years 11 months ago
A Calculus for Interaction Nets
hemical abstract machine Shinya Sato Himeji Dokkyo University, Faculty of Econoinformatics, 7-2-1 Kamiohno, Himeji-shi, Hyogo 670-8524, Japan Ian Mackie LIX, CNRS UMR 7161, ´Ecole...
Maribel Fernández, Ian Mackie
ICCAD
1994
IEEE
121views Hardware» more  ICCAD 1994»
15 years 10 months ago
A cell-based power estimation in CMOS combinational circuits
In this paper we present a power dissipation model considering the charging/discharging of capacitance at the gate output node as well as internal nodes, and capacitance feedthrou...
Jiing-Yuan Lin, Tai-Chien Liu, Wen-Zen Shen