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» A Generalization of Automatic Sequences
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JCDL
2004
ACM
103views Education» more  JCDL 2004»
15 years 11 months ago
Integration of biomedical text and sequence OAI repositories
Archived biomedical literature and sequence data are growing rapidly. The Open Archives Initiative's Protocol for Metadata Harvesting (OAI-PMH) [1] provides a convenient way ...
Yueyu Fu, Javed Mostafa
GECCO
2008
Springer
165views Optimization» more  GECCO 2008»
15 years 7 months ago
Multiple sequence alignment using a GLOCSA guided genetic algorithm
This paper introduces GLOCSA as a new scoring function to rate multiple sequence alignments. It is intended to be simple, considering the whole alignment at once and reflecting t...
Edgar David Arenas-Díaz, Helga Ochoterena-B...
AAECC
2006
Springer
120views Algorithms» more  AAECC 2006»
15 years 6 months ago
Continued fraction for formal laurent series and the lattice structure of sequences
Abstract Besides equidistribution properties and statistical independence the lattice profile, a generalized version of Marsaglia's lattice test, provides another quality meas...
Wilfried Meidl
IPL
2006
67views more  IPL 2006»
15 years 6 months ago
A remark on the subsequence problem for arc-annotated sequences with pairwise nested arcs
The Arc-Preserving Subsequence (APS) problem appears in the comparison of RNA structures in computational biology. Given two arcannotated sequences of length n and m < n, APS a...
Peter Damaschke
TIT
2002
57views more  TIT 2002»
15 years 6 months ago
Writing sequences on the plane
The problem of arranging two-dimensional arrays of data into one-dimensional sequences comes up in image processing, color quantization, and optical and magnetic data recording. A ...
Emina Soljanin