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» A General Method for Statistical Performance Evaluation
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BMCBI
2005
163views more  BMCBI 2005»
15 years 6 months ago
Rank-invariant resampling based estimation of false discovery rate for analysis of small sample microarray data
Background: The evaluation of statistical significance has become a critical process in identifying differentially expressed genes in microarray studies. Classical p-value adjustm...
Nitin Jain, HyungJun Cho, Michael O'Connell, Jae K...
JMLR
2010
139views more  JMLR 2010»
15 years 1 months ago
Causal learning without DAGs
Causal learning methods are often evaluated in terms of their ability to discover a true underlying directed acyclic graph (DAG) structure. However, in general the true structure ...
David Duvenaud, Daniel Eaton, Kevin P. Murphy, Mar...
EMNLP
2011
14 years 6 months ago
Training a Parser for Machine Translation Reordering
We propose a simple training regime that can improve the extrinsic performance of a parser, given only a corpus of sentences and a way to automatically evaluate the extrinsic qual...
Jason Katz-Brown, Slav Petrov, Ryan T. McDonald, F...
BMCBI
2008
107views more  BMCBI 2008»
15 years 6 months ago
A mixture model approach to sample size estimation in two-sample comparative microarray experiments
Background: Choosing the appropriate sample size is an important step in the design of a microarray experiment, and recently methods have been proposed that estimate sample sizes ...
Tommy S. Jørstad, Herman Midelfart, Atle M....
BMCBI
2007
93views more  BMCBI 2007»
15 years 6 months ago
The topology of metabolic isotope labeling networks
Background: Metabolic Flux Analysis (MFA) based on isotope labeling experiments (ILEs) is a widely established tool for determining fluxes in metabolic pathways. Isotope labeling ...
Michael Weitzel, Wolfgang Wiechert, Katharina N&ou...