Communication between natural or artificial agents relies on the use of a common vocabulary. Since sharing terms does not necessarily imply that the terms have exactly the same m...
Background: The most renowned biological ontology, Gene Ontology (GO) is widely used for annotations of genes and gene products of different organisms. However, there are shortcom...
: Clinical guidelines reuse existing clinical procedural knowledge while leaving room for flexibility by the care provider applying that knowledge. Guidelines can be viewed as gene...
The Tarragon Consulting team participated in the primary task of the TREC 2003 Genomics Track. We used a combination of knowledge-engineering and corpus analysis to construct sema...
This paper describes an application of IR and text categorization methods to a highly practical problem in biomedicine, specifically, Gene Ontology (GO) annotation. GO annotation...