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IPPS
2005
IEEE
15 years 11 months ago
FROST: Revisited and Distributed
FROST (Fold Recognition-Oriented Search Tool) [6] is a software whose purpose is to assign a 3D structure to a protein sequence. It is based on a series of filters and uses a dat...
Vincent Poirriez, Rumen Andonov, Antoine Marin, Je...
175
Voted
PDP
2008
IEEE
16 years 8 days ago
Just-In-Time Scheduling for Loop-based Speculative Parallelization
Scheduling for speculative parallelization is a problem that remained unsolved despite its importance. Simple methods such as Fixed-Size Chunking (FSC) need several ‘dry-runs’...
Diego R. Llanos Ferraris, David Orden, Belé...
SC
2000
ACM
15 years 10 months ago
Scalable Molecular Dynamics for Large Biomolecular Systems
We present an optimized parallelization scheme for molecular dynamics simulations of large biomolecular systems, implemented in the production-quality molecular dynamics program N...
Robert Brunner, James C. Phillips, Laxmikant V. Ka...
GRID
2003
Springer
15 years 11 months ago
Enabling the Co-Allocation of Grid Data Transfers
Data-sharing scientific communities use storage systems as distributed data stores by replicating content. In such highly replicated environments, a particular dataset can reside ...
Sudharshan Vazhkudai
CLUSTER
2004
IEEE
15 years 9 months ago
Cluster computing environment supporting single system image
Single system image(SSI) systems have been the mainstay of high-performance computing for many years. SSI requires the integration and aggregation of all types of resources in a c...
Min Choi, DaeWoo Lee, Seung Ryoul Maeng