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» A Data Transformation System for Biological Data Sources
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MSR
2006
ACM
16 years 17 days ago
Fine grained indexing of software repositories to support impact analysis
Versioned and bug-tracked software systems provide a huge amount of historical data regarding source code changes and issues management. In this paper we deal with impact analysis...
Gerardo Canfora, Luigi Cerulo
196
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AGENTS
1997
Springer
15 years 10 months ago
Agent-Based Expert Assistance for Visual Problem Solving
This paper presents a domain-independent architecture for facilitating visual problem solving between robots or softbots and humans. The architecture de nes virtual and human agen...
Erika Rogers, Robin R. Murphy, Barb Ericson
BMCBI
2006
116views more  BMCBI 2006»
15 years 6 months ago
Optimized mixed Markov models for motif identification
Background: Identifying functional elements, such as transcriptional factor binding sites, is a fundamental step in reconstructing gene regulatory networks and remains a challengi...
Weichun Huang, David M. Umbach, Uwe Ohler, Leping ...
BMCBI
2007
143views more  BMCBI 2007»
15 years 6 months ago
Factor analysis for gene regulatory networks and transcription factor activity profiles
Background: Most existing algorithms for the inference of the structure of gene regulatory networks from gene expression data assume that the activity levels of transcription fact...
Iosifina Pournara, Lorenz Wernisch
BMCBI
2006
178views more  BMCBI 2006»
15 years 6 months ago
GOLEM: an interactive graph-based gene-ontology navigation and analysis tool
Background: The Gene Ontology has become an extremely useful tool for the analysis of genomic data and structuring of biological knowledge. Several excellent software tools for na...
Rachel S. G. Sealfon, Matthew A. Hibbs, Curtis Hut...