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» A Data Transformation System for Biological Data Sources
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ESOP
2011
Springer
14 years 10 months ago
A New Method for Dependent Parsing
Abstract. Dependent grammars extend context-free grammars by allowing semantic values to be bound to variables and used to constrain parsing. Dependent grammars can cleanly specify...
Trevor Jim, Yitzhak Mandelbaum
CIKM
2006
Springer
15 years 10 months ago
Structure-based querying of proteins using wavelets
The ability to retrieve molecules based on structural similarity has use in many applications, from disease diagnosis and treatment to drug discovery and design. In this paper, we...
Keith Marsolo, Srinivasan Parthasarathy, Kotagiri ...
ASPLOS
1996
ACM
15 years 11 months ago
An Integrated Compile-Time/Run-Time Software Distributed Shared Memory System
On a distributed memory machine, hand-coded message passing leads to the most efficient execution, but it is difficult to use. Parallelizing compilers can approach the performance...
Sandhya Dwarkadas, Alan L. Cox, Willy Zwaenepoel
PERVASIVE
2004
Springer
16 years 4 days ago
Microbiology Tray and Pipette Tracking as a Proactive Tangible User Interface
Abstract. Many work environments can benefit from integrated computing devices to provide information to users, record users’ actions, and prompt users about the next steps to t...
Harlan Hile, Jiwon Kim, Gaetano Borriello
SAC
2003
ACM
16 years 1 days ago
Similar_Join: Extending DBMS with a Bio-specific Operator
Existing sequence comparison software applications lack automation, abstraction, performance, and flexibility. Users need a new way of studying and applying sequence comparisons i...
Jake Yue Chen, John V. Carlis