We present efficient sensitivity-analysis algorithms for two problems involving Markov models of sequence evolution: ancestral reconstruction in evolutionary trees and local ungap...
Research in bioinformatics and computational biology relies heavily on algorithms that facilitate the understanding of biological processes through the application of statistical ...
Data-driven learning based on shift reduce parsing algorithms has emerged dependency parsing and shown excellent performance to many Treebanks. In this paper, we investigate the e...
We present V-measure, an external entropybased cluster evaluation measure. Vmeasure provides an elegant solution to many problems that affect previously defined cluster evaluatio...
Molecular Dynamics simulations have become an interesting target for acceleration using Field-Programmable Gate Arrays (FPGA). Still to be attempted completely in FPGA hardware is...