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» A 3D pattern matching algorithm for DNA sequences
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SAC
2010
ACM
15 years 6 months ago
FANGS: high speed sequence mapping for next generation sequencers
Next Generation Sequencing machines are generating millions of short DNA sequences (reads) everyday. There is a need for efficient algorithms to map these sequences to the referen...
Sanchit Misra, Ramanathan Narayanan, Simon Lin, Al...
CSB
2003
IEEE
113views Bioinformatics» more  CSB 2003»
15 years 11 months ago
An Optimal DNA Segmentation Based on the MDL Principle
: The biological world is highly stochastic and inhomogeneous in its behaviour. There are regions in DNA with high concentration of G or C bases; stretches of sequences with an abu...
Wojciech Szpankowski, Wenhui Ren, Lukasz Szpankows...
ICCV
2007
IEEE
16 years 7 months ago
A Variational Method for Scene Flow Estimation from Stereo Sequences
This paper presents a method for scene flow estimation from a calibrated stereo image sequence. The scene flow contains the 3-D displacement field of scene points, so that the 2-D...
Frederik Huguet, Frederic Devernay
CVPR
2009
IEEE
17 years 1 months ago
Discriminative Subvolume Search for Efficient Action Detection
Actions are spatio-temporal patterns which can be characterized by collections of spatio-temporal invariant features. Detection of actions is to find the re-occurrences (e.g. th...
Junsong Yuan (Northwestern University), Zicheng Li...
APBC
2008
231views Bioinformatics» more  APBC 2008»
15 years 7 months ago
Optimal Algorithm for Finding DNA Motifs with Nucleotide Adjacent Dependency
: Finding motifs and the corresponding binding sites is a critical and challenging problem in studying the process of gene expression. String and matrix representations are two pop...
Francis Y. L. Chin, Henry C. M. Leung, Man-Hung Si...